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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGACAGCGACCCTGATGAACCATCAGACAGTGGCGACAACCAGGGTGATTTAGCAATCATGACAAGgttgagaatacaataaatttaataactgtttagctcaaacgttcaaaattttgcaaattgtgcgcacacacaaaaaaaagaatgataaagttataacaatactttgaacattctggtggttcactaagtctataatattctctgcttgtatgcag

Basic information

species Glycine max
transcript GLYMA08G20730.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192303971|gb|FG993843.1|FG993843
EST:     GAACCATCAGACAGTGGCGACAACCAGGGTGATTTAGCAATCATGACAAG                         TGATGAAACGGCTGTTGGTTCTGACAATGCTGTATCTGTG
genomic: GAACCATCAGACAGTGGCGACAACCAGGGTGATTTAGCAATCATGACAAGgttgagaata ... ttgtatgcagTGATGAAACGGCTGTTGGTTCTGACAATGCTGTATCTGTG
EST: gi|298174672|gb|HO014703.1|HO014703
EST:     GAACCATCAGACAGTGGCGACAACCAGGGTGATTTAGCAATCATGACAAG                         TGATGAAACGGCTGTTGGTTTTGACAATGCTGTATCTGTG
genomic: GAACCATCAGACAGTGGCGACAACCAGGGTGATTTAGCAATCATGACAAGgttgagaata ... ttgtatgcagTGATGAAACGGCTGTTGGTTCTGACAATGCTGTATCTGTG