1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGCAAAATGGAAGATGGTGGTGGGTCATCATACCATCAATAGTGCTGGGCATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaatcacattctcaaattaatacgttaattactcgtatttaagattcctcatgtttttagtatgacaattacattgctgccatattaaaacaat...
species | Glycine max |
transcript | GLYMA08G09910.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAG GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCACEST: gi|15001209|gb|BI322023.1|BI322023
genomic: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAC
EST: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAG GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGEST: gi|254331559|gb|GR843516.1|GR843516
genomic: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAACAACGTTGATGCATACATAAATGGGCATGACCACTG
EST: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAG GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCACEST: gi|12690302|gb|BG156638.1|BG156638
genomic: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAC
EST: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAG GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCACEST: gi|213603082|gb|DB960401.1|DB960401
genomic: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAC
EST: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAG GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCACEST: gi|192302904|gb|FG998586.1|FG998586
genomic: ATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAC
EST: AAACAGCTACTTGTTCCCATCTTAGAG GCAAACAAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAEST: gi|254331758|gb|GR843608.1|GR843608
genomic: AAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAAC-AACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCA
EST: ATCTTAAACAGCTACTTGTTCCCATCTTAGAG GCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAC
genomic: ATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaat ... attggtccagGCAAACAACGTTGATGCATACATAAATGGGCATGACCACTGCTTGCAGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCAAAATGGAAGATGGTGGTGGGTCATCATACCATCAATAGTGCTGGGCATCATGGTAGCACCGAAGATCTTAAACAGCTACTTGTTCCCATCTTAGAGgtaatcaaatcacattctcaaattaatacgttaattactcgtatttaagattcctcatgtttttagtatgacaattacattgctgccatattaaaacaat
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