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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATATGACTGGCTTCTGTCGTTTGTCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGCATATCTTCCAAGgtactctattgatcttcttgttttgttggcattctagtcaacctcctttcttataaaacaaaaactctatcgtgcag

Basic information

species Glycine max
transcript GLYMA08G01640.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G01640.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv02s0025g03700.t01 (Vitis vinifera), 5'ss of exon 6
ATATGACTGGCTTCTGTCGTTTGTCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGCATATCTTCCAAGgtact-ctattgatcttcttgttttgttggcattctagtcaacctcctttcttataaaacaaaaactctatcgtgcag
| || |||||| ||||||| |  |||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || |||||| ||||||| |||||||||  |  ||  |||||   | |  |     || || ||         | |  |  ||  | ||||    | |||||
ACATCACTGGCCTCTGTCGCTCATCTCAGTTTAAAGTTGCAGATTTCTCATACAACTTTTTTGTTGGAAGCATACCTAAGTGCTTGTCATATCTGCCAAGgtaccaccctttctcttcccttctcatatttgttgta-tcttttaatactttgttgtaatgacaactg---catgcag