1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAAAGCATTTCTGCTTTAGGAATACCAGAGATGTTAGCACGCCATCATCTATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttttctttcatcttatgttcatctattgactattgtccacatgagattgtttttacttttttcttctaaagcattttgtcaataatcttgtca...
species | Glycine max |
transcript | GLYMA07G39530.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAG GGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTAEST: gi|192305693|gb|FG998365.1|FG998365
genomic: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttt ... tatgatgcagGGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTA
EST: ATTTAAACAGTTTGACCCCTGTTAGTGCTGATCAATTGTTGCCATATAAG GGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGAEST: gi|10255504|gb|BE823270.1|BE823270
genomic: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttt ... tatgatgcagGGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGA
EST: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAG GGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTAEST: gi|192306779|gb|FG998146.1|FG998146
genomic: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttt ... tatgatgcagGGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTA
EST: ATTTAAACAGTTTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAG GGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTAEST: gi|193469063|gb|FK433715.1|FK433715
genomic: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttt ... tatgatgcagGGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTA
EST: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAG GGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGEST: gi|7042324|gb|AW472218.1|AW472218
genomic: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttt ... tatgatgcagGGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTG
EST: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAG GGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTA
genomic: ATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttt ... tatgatgcagGGCATGGTCAGCCCGGAATGCTGGTTATATGTTTCTGCTCGCTAGATCGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGCATTTCTGCTTTAGGAATACCAGAGATGTTAGCACGCCATCATCTATTTAAACAGTCTGACACCTGTTAGTGCTGATCAATTGTTGCCATATAAGgttaactttttctttcatcttatgttcatctattgactattgtccacatgagattgtttttacttttttcttctaaagcattttgtcaataatcttgtca
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