1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TATCAAGGAGAGAAGGGTTGGACGCCATCAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagcaatatgatgaagttatgcactagtagccggccattacttttttgctttttcagatttcttgattcttatttcattgtcatttaatcttatg...
species | Glycine max |
transcript | GLYMA07G33380.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTG TCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAGAACATCTTGACEST: gi|208052055|gb|GD850442.1|GD850442
genomic: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagca ... aaaatttcagTCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAGAACATCTTGAC
EST: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTG TCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAGEST: gi|193484447|gb|FK451587.1|FK451587
genomic: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagca ... aaaatttcagTCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAG
EST: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTG TCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAGEST: gi|193665397|gb|FK613387.1|FK613387
genomic: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagca ... aaaatttcagTCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAG
EST: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTG TCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAGEST: gi|193558487|gb|FK515348.1|FK515348
genomic: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagca ... aaaatttcagTCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAG
EST: CAAAATACCCTGGACTATTGGNGAAGCTTTTAGCAAAGAGCCAAACAGTG TCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAG
genomic: CAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagca ... aaaatttcagTCTGGCTTTTTCCTGGTGCAATATGGTCACTTGTGGCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATCAAGGAGAGAAGGGTTGGACGCCATCAAAATACCCTGGACTATTGGAGAAGCTTTTAGCAAAGAGCCAAACAGTGgtatgtagcaatatgatgaagttatgcactagtagccggccattacttttttgctttttcagatttcttgattcttatttcattgtcatttaatcttatg
- - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG