1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTGGTGCACGATTAATTTCCCATGCAGGTAGCCTCACAAATTTAGCTAAATGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAGgttcttaacttcaccttctcctggtacaattctattagggcattttttcttgaataataacataaaaacaataaatcattcaacctcttcaactacatgc...
species | Glycine max |
transcript | GLYMA07G11560.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAG GGCATTAAAAACAAGAGGAAACACTCCTAAATATGGTCTGATATTCCACTCEST: gi|208301489|gb|GE100301.1|GE100301
genomic: TGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAGgttcttaact ... ttctattcagGGCATTAAAAACAAGAGGAAACACTCCTAAATATGGTCTGATATTCCACTC
EST: TGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAG GGCATTAAAAACAAGAGGAAACACTCCTAAATATGGCCTGATATTCCACTCEST: gi|192317143|gb|FK007882.1|FK007882
genomic: TGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAGgttcttaact ... ttctattcagGGCATTAAAAACAAGAGGAAACACTCCTAAATATGGTCTGATATTCCACTC
EST: TGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAG GGCATTAAAAACAAGAGGAAACACTCCTAAATATGGTCTGATATTCCACTC
genomic: TGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAGgttcttaact ... ttctattcagGGCATTAAAAACAAGAGGAAACACTCCTAAATATGGTCTGATATTCCACTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGTGCACGATTAATTTCCCATGCAGGTAGCCTCACAAATTTAGCTAAATGCCCTTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAGgttcttaacttcaccttctcctggtacaattctattagggcattttttcttgaataataacataaaaacaataaatcattcaacctcttcaactacatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttctc
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctcttc