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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATCTTGCTAATAATAATTTCAATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCTgtgtgtaatcatcttcttaacttcttgtaaacttcttattgtataaacctccttcacaagcaactggaatcatttttttaatttaatcttccttatgcag

Basic information

species Glycine max
transcript GLYMA07G05230.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213590529|gb|DB973302.1|DB973302
EST:     AATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCT                         GAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTCCAAAA
genomic: AATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCTgtgtgtaatc ... ccttatgcagGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTCCAAAA
EST: gi|193344980|gb|FK311606.1|FK311606
EST:     AATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCT                         GAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTCCAAAA
genomic: AATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCTgtgtgtaatc ... ccttatgcagGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTCCAAAA
EST: gi|5606215|gb|AI900313.1|AI900313
EST:     AATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCT                         GAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGGTGATTTCCAAAA
genomic: AATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCTgtgtgtaatc ... ccttatgcagGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTCCAAAA