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ATTTGGGCAGCCTATCAAAGTTAATTGGGCATATGCTAGTGGTCAGAGAGAGGATACGTCAGgttagttcacatttctgagttaaatatattgatatttttgggccattttgtttaaactttgaaaaagtgttttttaaaaaatttattttttaagaaaaag...
species | Glycine max |
transcript | GLYMA07G04640.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GTCAGAGAGAGGATACGTCAG GTCACTACAATATATTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTAEST: gi|7146716|gb|AW508638.1|AW508638
genomic: GTCAGAGAGAGGATACGTCAGgttagttcac ... taatttgcagGTCACTACAATATATTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTA
EST: TATCAAAGTTAATTGGGCATATGCTAGTGGTCAGAGAGAGGATACGTCAG GTCACTACAATATATTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTAEST: gi|208032967|gb|GD830024.1|GD830024
genomic: TATCAAAGTTAATTGGGCATATGCTAGTGGTCAGAGAGAGGATACGTCAGgttagttcac ... taatttgcagGTCACTACAATATATTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTA
EST: TATCAAAGTTAATTGGGCATATGCTAGTGGTCAGAGAGAGGATACGTCAG GTCACTACAATATATTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTA
genomic: TATCAAAGTTAATTGGGCATATGCTAGTGGTCAGAGAGAGGATACGTCAGgttagttcac ... taatttgcagGTCACTACAATATATTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTGGGCAGCCTATCAAAGTTAATTGGGCATATGCTAGTGGTCAGAGAGAGGATACGTCAGgttagttcacatttctgagttaaatatattgatatttttgggccattttgtttaaactttgaaaaagtgttttttaaaaaatttattttttaagaaaaag
- - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagaaaaa