1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTATGAAGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttgagcttttgaaaccttgtgctttaatttctatgaaagcgaaggcattgtgatattaacatgtttgtgtaacttctgagggaatgtattatc...
species | Glycine max |
transcript | GLYMA06G24520.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGGCCACGTCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACATEST: gi|208316849|gb|GE115855.1|GE115855
genomic: GGGCCACG-CACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACAT
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACEST: gi|208142142|gb|GD934888.1|GD934888
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTAC
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACATEST: gi|208270669|gb|GE066919.1|GE066919
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACAT
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACEST: gi|193515760|gb|FK474330.1|FK474330
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTAC
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACATEST: gi|193488849|gb|FK453214.1|FK453214
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACAT
EST: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACATEST: gi|207754217|gb|GD724753.1|GD724753
genomic: AGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACAT
EST: TTCACTTGCTGAGTTTGTAAATACGGAAGGAG GAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACAT
genomic: TTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttg ... tttctcgcagGAACAAATGTGAAGATTGCTACAGCTCCTTCCAATGTAGTGGTGCTTACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGAAGGGCCACGCACTGCTGATTCACTTGCTGAGTTTGTAAATACGGAAGGAGgtactgcttgagcttttgaaaccttgtgctttaatttctatgaaagcgaaggcattgtgatattaacatgtttgtgtaacttctgagggaatgtattatc
- - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG