1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AAGCTCTTATTTTGTGGATTCTGCTCCAGTTGTGCCAGAGGATAACAGAAAACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTgtatgcaaacttcttttcaattatgttatcattgatttattttctaaaatgtctcagatgttttctgattagatgttacgtatctctattttcag
species | Glycine max |
transcript | GLYMA06G23560.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGT CCCAGATGGCATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTATEST: gi|9985718|gb|BE659826.1|BE659826
genomic: AACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTgtatgcaaac ... ctattttcagCCCAGATGGCATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTAT
EST: AACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGT CCCAGATGGCATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTATEST: gi|151394670|gb|EV264541.1|EV264541
genomic: AACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTgtatgcaaac ... ctattttcagCCCAGATGGCATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTAT
EST: AACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGT CCCAGATGGCATGATCTAGACGTGAATCAGCATGTTAACAATGTGAAGTAT
genomic: AACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTgtatgcaaac ... ctattttcagCCCAGATGGCATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCTCTTATTTTGTGGATTCTGCTCCAGTTGTGCCAGAGGATAACAGAAAACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTgtatgcaaacttcttttcaattatgttatcattgatttattttctaaaatgtctcagatgttttctgattagatgttacgtatctctattttcag
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