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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCAGCACAGGCAGCAAGTTTACTTCTAGTAGGCCCCTTTATGGACTACTGGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACGgtaagtttctctatttcttttctagtttttttttttttttaatgttttgttgtgaggaggaagagaaacagagacttgtgaaatttatttatgtatcggg...

Basic information

species Glycine max
transcript GLYMA06G15280.2
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6847634|gb|AW349924.1|AW349924
EST:     GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACG                         TTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
genomic: GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACGgtaagtttct ... ctgtctgcagTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
EST: gi|4313494|gb|AI460613.1|AI460613
EST:     GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACG                         TTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
genomic: GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACGgtaagtttct ... ctgtctgcagTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
EST: gi|14990478|gb|BI316151.1|BI316151
EST:     GGTTGACGGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACA                         TTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
genomic: GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACGgtaagtttct ... ctgtctgcagTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
EST: gi|8284386|gb|BE021945.1|BE021945
EST:     GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACG                         TTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG
genomic: GGTTGACTGGCAAACGAGTTGATGCCTACGGCTATGGTTTGACATCCACGgtaagtttct ... ctgtctgcagTTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAG