1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTAACAGCTCCTGGAGGGAGAACAAGAGATAGAAGGAGTGACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCGgtgactatttctttcctgaatcaataatcattaatgagtcatttatctttacattacaattgcacctctgatataccatcttatttgcag
species | Glycine max |
transcript | GLYMA06G12370.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCG AGTGAAAAAGAGGATCCAACGACTGTCATAGAAAAGCAGGAGTGGGAGCATEST: gi|209724186|gb|BW659720.1|BW659720
genomic: ACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCGgtgactattt ... ttatttgcagAGTGAAAAAGAGGATCCAACGACTGTCATAGAAAAGCAGGAGTGGGAGCAT
EST: ACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCG AGTGAAAAAGAGGATCCAACGACTGTCATAGAAAAGCAGGAGTGGGAGCATEST: gi|51336688|gb|CO980554.1|CO980554
genomic: ACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCGgtgactattt ... ttatttgcagAGTGAAAAAGAGGATCCAACGACTGTCATAGAAAAGCAGGAGTGGGAGCAT
EST: ACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCG AGTGAAAAAGAGGATCCAACGACTGTCATAGAAAAGCAGGAGTGGGAGCAT
genomic: ACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCGgtgactattt ... ttatttgcagAGTGAAAAAGAGGATCCAACGACTGTCATAGAAAAGCAGGAGTGGGAGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAACAGCTCCTGGAGGGAGAACAAGAGATAGAAGGAGTGACTTGCTTGTTATATCTGATCGTGGGAGCTCCTTCAAAATAATACATGCGgtgactatttctttcctgaatcaataatcattaatgagtcatttatctttacattacaattgcacctctgatataccatcttatttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT