1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGCAACATTATTACCATTTATTAAACGTTTTCTGCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtgacaccctgcctccttattttgttttttcttaatgttaatattcttgctatgaacttgtggtgtatctagcctttggctattattaccact...
species | Glycine max |
transcript | GLYMA06G08620.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|6072670|gb|AW102057.1|AW102057
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|6072670|gb|AW102057.1|AW102057
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|6072670|gb|AW102057.1|AW102057
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|58024459|gb|CX711200.1|CX711200
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|58024459|gb|CX711200.1|CX711200
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|58024459|gb|CX711200.1|CX711200
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|58024459|gb|CX711200.1|CX711200
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|254349303|gb|GR860101.1|GR860101
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|254349303|gb|GR860101.1|GR860101
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|254349303|gb|GR860101.1|GR860101
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|254349303|gb|GR860101.1|GR860101
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|213600256|gb|DB964336.1|DB964336
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|213600256|gb|DB964336.1|DB964336
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|213600256|gb|DB964336.1|DB964336
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC GEST: gi|213600256|gb|DB964336.1|DB964336
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
EST: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCC G
genomic: GCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtg ... tcttacacag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCAACATTATTACCATTTATTAAACGTTTTCTGCCAAAGCATTGGAACGATGACGTTATAGTCTGGCATTTTCCATATTTCCgttgtatgtgacaccctgcctccttattttgttttttcttaatgttaatattcttgctatgaacttgtggtgtatctagcctttggctattattaccact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcctt