1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGCAGTTAAAGCAGATCAATAATTGGTTTATCAATCAAAGGAAGAGGAACTGGCATAGCAGTCCCTCAACTTCTACTGTTTTGAAGAGCAAGCGCAAAAGgtattcatattaaaagatgtgcttttactaatttatattttgcatgagctttgcaccaatcttagtttaaaaagaagtaatgcag
species | Glycine max |
transcript | GLYMA06G06890.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGGCATAGCAGTCCCTCAACTTCTACTGTTTTGAAGAGCAAGCGCAAAAG GTCTTAATAGTGCTGATCAGTACACGTEST: gi|298195893|gb|HO044284.1|HO044284
genomic: TGGCATAGCAGTCCCTCAACTTCTACTGTTTTGAAGAGCAAGCGCAAAAGgtattcatat ... agtaatgcagGTCTTAATAGTGCTGATCAGTACACGT
EST: TGGCATAGCAGTCCCTCAACTTCTACTGTTTTGAAGAGCAAGCGCAAAAG GTCTTAATAGTGCTGATCAGTACACGTAAATGGAGGAAAACTCGAGAACCA
genomic: TGGCATAGCAGTCCCTCAACTTCTACTGTTTTGAAGAGCAAGCGCAAAAGgtattcatat ... agtaatgcagGTCTTAATAGTGCTGATCAGTACACGTAAATGGAGGAAAACTCGAGAACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAGTTAAAGCAGATCAATAATTGGTTTATCAATCAAAGGAAGAGGAACTGGCATAGCAGTCCCTCAACTTCTACTGTTTTGAAGAGCAAGCGCAAAAGgtattcatattaaaagatgtgcttttactaatttatattttgcatgagctttgcaccaatcttagtttaaaaagaagtaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG