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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATTTCAAGGAAAACCGTTTATCTGGCCAGATACCTGACGAACTTGGTGATTGTTCCTCTTTGAAAAGCATgtatgtttcataattcatactctgatgaattgaattcaattgataatagattaggttttgactgccaagtgaaaatgtcataatgggggacttttgcattttactgtgtggttcag

Basic information

species Glycine max
transcript GLYMA06G05900.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208211558|gb|GE010911.1|GE010911
EST:     GGTGATTGTTCCTCTTTGAAAAGCAT                         AGACTTGTCATTTAATGAGATTCGGGGAGATATACCGTTTTCGGTTTCAAA
genomic: GGTGATTGTTCCTCTTTGAAAAGCATgtatgtttca ... tgtggttcagAGACTTGTCATTTAATGAGATTCGGGGAGATATACCGTTTTCGGTTTCAAA
EST: gi|208332397|gb|GE128662.1|GE128662
EST:     TCTGGCCAGATACCTGACGAACTTGGTGATTGTTCCTCTTTGAAA-GCAT                         AGACTTGTCATTTAATGAGATTCGGGGAGATATACCGTTTTCGG
genomic: TCTGGCCAGATACCTGACGAACTTGGTGATTGTTCCTCTTTGAAAAGCATgtatgtttca ... tgtggttcagAGACTTGTCATTTAATGAGATTCGGGGAGATATACCGTTTTCGG
EST: gi|193661296|gb|FK607472.1|FK607472
EST:     TCTGGCCAGATACCTGACGAACTTGGTGATTGTTCCTCTTTGAAAAGCAT                         AGACTTGTCATTTAATGAGATTCGGGGAGATATACCGTTTTCGGTTTCAAA
genomic: TCTGGCCAGATACCTGACGAACTTGGTGATTGTTCCTCTTTGAAAAGCATgtatgtttca ... tgtggttcagAGACTTGTCATTTAATGAGATTCGGGGAGATATACCGTTTTCGGTTTCAAA