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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGAAATTATGGAAATTCAGAAAAATCAAgtaagttgggcctttgttttgtttctttcttatacagcattccttttgctcctttttatttttcatcagtcattgctaagtatttgcgttgatcttaatt...

Basic information

species Glycine max
transcript GLYMA06G04350.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193425062|gb|FK389385.1|FK389385
EST:     GCAGAAATTATGGAAATTCAGAAAAATCAA                         GTTAAGGAAATGATGAATTTGCAACGAGAAGTGAAGAGAAGACGCCTAAGA
genomic: GCAGAAATTATGGAAATTCAGAAAAATCAAgtaagttggg ... aatattgcagGTTAAGGAAATGATGAATTTGCAACGAGAAGTGAAGAGAAGACGCCTAAGA
EST: gi|16996369|gb|BM085741.1|BM085741
EST:     GCAGAAATTATGGAAATTCAGAAAAATCAA                         GTTAAGGAAATGATGAATTTGCAACGAGAAGTGAAGAGAAGACGCCTAAGA
genomic: GCAGAAATTATGGAAATTCAGAAAAATCAAgtaagttggg ... aatattgcagGTTAAGGAAATGATGAATTTGCAACGAGAAGTGAAGAGAAGACGCCTAAGA