1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATCTTTGACGACTTGGATTTGCCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGgtaattataattttctttgtttgtgttctctttttgctatgaaacatgtcgacttggtttggctccttatttgagttttataaatcaacatgtccactgg...
species | Glycine max |
transcript | GLYMA05G35220.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGG AATGAAGAGTGTTATTAATCACTTCAAAGGGAATTCTGGTTTTCCCCGTTTEST: gi|151403649|gb|EV273459.1|EV273459
genomic: TTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGgtaattataa ... tatttggcagAATGAAGAGTGTTATTAATCACTTCAAAGGGAATTCTGGTTTTCCCCGTTT
EST: TTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGG AGTGAAGAGTGTTATTAATCACTTCAAAGGGAATTCTGGTTTTCCCCGTTTEST: gi|192307382|gb|FK001970.1|FK001970
genomic: TTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGgtaattataa ... tatttggcagAATGAAGAGTGTTATTAATCACTTCAAAGGGAATTCTGGTTTTCCCCGTTT
EST: AAGGGTGGACATGGAGGTCACAATGG AATGAAGAGTGTTATTAATCACTTCAAAGGGAATTCTGGTTTTCCCCGTTT
genomic: AAGGGTGGACATGGAGGTCACAATGGgtaattataa ... tatttggcagAATGAAGAGTGTTATTAATCACTTCAAAGGGAATTCTGGTTTTCCCCGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTTTGACGACTTGGATTTGCCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGTCACAATGGgtaattataattttctttgtttgtgttctctttttgctatgaaacatgtcgacttggtttggctccttatttgagttttataaatcaacatgtccactgg
- - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG