1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AGCTGAGAAGACTGTACAGATTGCCTTGGCTAAAGCCTCCATGGTGGATGATCTCCAAAATAAAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAGgtatttgcaatttcgtatggtgtttccctctccaagtatgccagccttaataatgtaatttcttatatttggttttggtatcatcatcacctctcctag
species | Glycine max |
transcript | GLYMA05G34560.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TCTCCAAAATAAAAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAG GAAGAAAATAAAATTTTEST: gi|193700394|gb|FK636353.1|FK636353
genomic: TCTCCAAAAT-AAAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAGgtatttgcaa ... cctctcctagGAAGAAAATAAAATTTT
EST: TCTCCAAAATAAAAATACAAGAGCTAATTAAACAGATTGAGATTTGCCAG GAAGAAAATAAAATTTTGGACAAAATGCATAGACTGAAGGTGGCAGAGGTTEST: gi|193663723|gb|FK611189.1|FK611189
genomic: TCTCCAAAATAAAAAT-CAAGAGCTAATTAAACAGATTGAGATTTGCCAGgtatttgcaa ... cctctcctagGAAGAAAATAAAATTTTGGACAAAATGCATAGACTGAAGGTGGCAGAGGTT
EST: ATCTCCAAAAT-AAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAG GAAGAAAATAAAATTTT
genomic: ATCTCCAAAATAAAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAGgtatttgcaa ... cctctcctagGAAGAAAATAAAATTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTGAGAAGACTGTACAGATTGCCTTGGCTAAAGCCTCCATGGTGGATGATCTCCAAAATAAAAATCAAGAGCTAATTAAACAGATTGAGATTTGCCAGgtatttgcaatttcgtatggtgtttccctctccaagtatgccagccttaataatgtaatttcttatatttggttttggtatcatcatcacctctcctag
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