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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCCTTGTCAGGGTGCTTGAATCTTCTTCTGGAAACACTCCCTGCTACTCTTTGGTTTTATTTCAAGACCTGCTAGTGTCCACAAGTCTATCTCCTgtaggtttagtacaaatttattcttactgaatttgattgggcaagatgcttggtcattcattaagttacttaattgaccttgactcttttgtcag

Basic information

species Glycine max
transcript GLYMA05G34400.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207819585|gb|GD790821.1|GD790821
EST:     ACTCTTTGGTTTTATTTCAAGACCTGCTAGTGTCCACAAGTCTATCTCCT                         GATGACACCATAAATTTATTCACATATGCTGTGCTAAGGTTGACTCCCCAT
genomic: ACTCTTTGGTTTTATTTCAAGACCTGCTAGTGTCCACAAGTCTATCTCCTgtaggtttag ... cttttgtcagGATGACACCATAAATTTATTCACATATGCTGTGCTAAGGTTGACTCCCCAT
EST: gi|7589888|gb|AW705653.1|AW705653
EST:     ACTCTTTGGTTTTATTTCAAGACCTGCTAGTGTCCACAAGTCTATCTCCT                         GATGACACCATAAATTTATTCACATATGCTGTGCTAAGGTTGACTCCCCAT
genomic: ACTCTTTGGTTTTATTTCAAGACCTGCTAGTGTCCACAAGTCTATCTCCTgtaggtttag ... cttttgtcagGATGACACCATAAATTTATTCACATATGCTGTGCTAAGGTTGACTCCCCAT