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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCACAAATGAGCCGCATATGTCTCATGCGATGATCAACTTTGATTACAAGgtcagctaccttactatttctcgactacaccatgcaatgcctcacccatctcctagtcatgtttttgcatgttctttctattaaattttgaattttgtta...

Basic information

species Glycine max
transcript GLYMA05G34360.2
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193394687|gb|FK358188.1|FK358188
EST:     TGCGATGATCAACTTTGATTACAAG                         GGAAAAGACTATAGGACACAATTTCAACTTGGTAATGGAGCCTTGCTAGGA
genomic: TGCGATGATCAACTTTGATTACAAGgtcagctacc ... tatttttcagGGAAAAGACTATAGGACACAATTTCAACTTGGTAATGGAGCCTTGCTAGGA
EST: gi|192296647|gb|FG991215.1|FG991215
EST:     TCACAAATGAGCCGCATATGTCTCATGCGATGATCAACTTTGATTACAAG                         GGAAAAGACTATAGGACACAATTTCAACTTGGTAATGGAGCCTTGCTAGGA
genomic: TCACAAATGAGCCGCATATGTCTCATGCGATGATCAACTTTGATTACAAGgtcagctacc ... tatttttcagGGAAAAGACTATAGGACACAATTTCAACTTGGTAATGGAGCCTTGCTAGGA