1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTCCCAAGAGAACTATCATATCTGCCCATATCCAGATTGTGGAAAGAGATATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagtgtttcctatttgtgttgctggtacattttccttatttttttaccactcagtctattaatattatatgatgcattttattatgtaaagcat...
species | Glycine max |
transcript | GLYMA05G30150.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAAEST: gi|6094874|gb|AW119541.1|AW119541
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAA
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAAEST: gi|9985416|gb|BE659524.1|BE659524
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAA
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAAEST: gi|192333661|gb|FK025772.1|FK025772
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAA
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAA-G A-TGCATCCGTGGATGTGACAAAGTACACTACEST: gi|5126756|gb|AI748492.1|AI748492
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTAC
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATGCGTGGATGTGACATACTACACTACTCCCTCTTCAGAGAAGCAAEST: gi|193512894|gb|FK468664.1|FK468664
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAA
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAAEST: gi|16106221|gb|BI893961.1|BI893961
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAA
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAAEST: gi|207811734|gb|GD785979.1|GD785979
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGATGTGACAAAGTACACTACTCCCCCTTCAGAGAAGCAA
EST: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAG AATGCATCCGTGGA
genomic: ATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagt ... tatcttacagAATGCATCCGTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCCCAAGAGAACTATCATATCTGCCCATATCCAGATTGTGGAAAGAGATATGCTCATGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGgttgggtagtgtttcctatttgtgttgctggtacattttccttatttttttaccactcagtctattaatattatatgatgcattttattatgtaaagcat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA