1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATTGGATCCTTTGAGACAAATGATCAATGGTGTTCCTTTGGAGGATGCTCGCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAAgtaagtcaaagtttagaatggattcgtagttctgctcttggatcaacctgtaacttaattgtgatttgaactctgtatctcattctcatatatgggatgg...
species | Glycine max |
transcript | GLYMA05G29700.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAA AGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCTEST: gi|151413137|gb|EV282945.1|EV282945
genomic: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAAgtaagtcaaa ... attcaatcagAGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCT
EST: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAA AGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCTEST: gi|193443747|gb|FK405671.1|FK405671
genomic: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAAgtaagtcaaa ... attcaatcagAGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCT
EST: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAA AGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCTEST: gi|193322122|gb|FK287028.1|FK287028
genomic: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAAgtaagtcaaa ... attcaatcagAGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCT
EST: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAA AGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCTEST: gi|208306230|gb|GE107851.1|GE107851
genomic: GCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAAgtaagtcaaa ... attcaatcagAGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCT
EST: AGACAAGAAGCAGAGGCACAA AGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCT
genomic: AGACAAGAAGCAGAGGCACAAgtaagtcaaa ... attcaatcagAGAGAGGAGATTGCTAGAAGACAAGCACGGGTTCGGGAAGCTCCAACTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGGATCCTTTGAGACAAATGATCAATGGTGTTCCTTTGGAGGATGCTCGCCATCTTGCTCAACGATATAGTCGGATGAGACAAGAAGCAGAGGCACAAgtaagtcaaagtttagaatggattcgtagttctgctcttggatcaacctgtaacttaattgtgatttgaactctgtatctcattctcatatatgggatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC