1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAAGCAGATAGAGGTGCACACAATTATTTCTTGGAAAAGGGTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAGgtcagagtgccctttcatctttagttatttctgtatttactttccttatttttcctattacttctgtttaatatcattgaactgtcgaagtataacttca...
species | Glycine max |
transcript | GLYMA05G26450.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAG GATGCAGCTTCCCTCTCAGTTGCAATCTTGAAGAAAAACTTCCGTGGACAGEST: gi|120494805|gb|EH222972.1|EH222972
genomic: GTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAGgtcagagtgc ... tccacaccagGATGCAGCTTCCCTCTCAGTTGCAATCTTGAAGAAAAACTTCCGTGGACAG
EST: GTNTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAG GATGCAGCTTCCCTCTCAGTTGCAATCTTGAAGAAAAACTTGCGTGGACAGEST: gi|8826056|gb|BE209848.1|BE209848
genomic: GTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAGgtcagagtgc ... tccacaccagGATGCAGCTTCCCTCTCAGTTGCAATCTTGAAGAAAAACTTCCGTGGACAG
EST: GTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAG GATGCAGCTTCCCTCTCAGTTGCAATCTTGAAGAAAAACTTCCGTGGACAG
genomic: GTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAGgtcagagtgc ... tccacaccagGATGCAGCTTCCCTCTCAGTTGCAATCTTGAAGAAAAACTTCCGTGGACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGCAGATAGAGGTGCACACAATTATTTCTTGGAAAAGGGTGTTGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAGgtcagagtgccctttcatctttagttatttctgtatttactttccttatttttcctattacttctgtttaatatcattgaactgtcgaagtataacttca
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