1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCAGCAGCATTCTTCTTCAAATGAAGTTGGTTGTCTCTTCTTTGCTAAAGTTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgcttataaaatgttgtcttacttgaaactttacacttttggtaatgtccttgacaattgtcctatgaccaaatgatcatccag
species | Glycine max |
transcript | GLYMA05G26250.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCTEST: gi|22931701|gb|BU548840.1|BU548840
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCT
EST: TTGGTGATGGAACATATATGCAAGCACTGGGCNNNNCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCTEST: gi|9440046|gb|BE440557.1|BE440557
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCT
EST: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCTEST: gi|22523485|gb|BU082296.1|BU082296
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCT
EST: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCTEST: gi|192330285|gb|FK020570.1|FK020570
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCT
EST: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAG-AAGCATEST: gi|193532272|gb|FK490188.1|FK490188
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCAT
EST: TTGCTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCTEST: gi|207737599|gb|GD716035.1|GD716035
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATCATTTTTCGAATCT
EST: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGG GTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATC
genomic: TTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgctt ... gatcatccagGTGCATGTCTGTGATATTGATAATCCAGAGGAAGCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGCAGCATTCTTCTTCAAATGAAGTTGGTTGTCTCTTCTTTGCTAAAGTTGGTGATGGAACATATATGCAAGCACTGGGCGGTTCTACACAAACTAGGgttggtgcttataaaatgttgtcttacttgaaactttacacttttggtaatgtccttgacaattgtcctatgaccaaatgatcatccag
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