1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGCCAAAGTGGGTGATATCATACTTCCTGTTGTACCAGGAATAGCTAGCGGGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGgtagagtttgtcatttggtttggatatggttcgctcagtttataatcaacttaagatcttgaattgtagttggattaataattataattggtaggtcatt...
species | Glycine max |
transcript | GLYMA05G02710.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAG ATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAAEST: gi|31464329|gb|CD406357.1|CD406357
genomic: GGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGgtagagtttg ... aacctttcagATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAA
EST: GGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAG ATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAAEST: gi|22523463|gb|BU082274.1|BU082274
genomic: GGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGgtagagtttg ... aacctttcagATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAA
EST: GGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAG ATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAA
genomic: GGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGgtagagtttg ... aacctttcagATGAATTCTCTTGGCTCACTCCTGAAAGTTAGCAATCACCTACCCGATGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCCAAAGTGGGTGATATCATACTTCCTGTTGTACCAGGAATAGCTAGCGGGGAGGGCTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGgtagagtttgtcatttggtttggatatggttcgctcagtttataatcaacttaagatcttgaattgtagttggattaataattataattggtaggtcatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG