1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTTGCTCGTCACCCAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctctttttcctattttggcccttcttggtaaccaatctctttgctgtgccatgtaatgaggtctttagtgtgcaatatctgcatatcttttaat...
species | Glycine max |
transcript | GLYMA05G02190.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAG CCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAAEST: gi|254343989|gb|GR857745.1|GR857745
genomic: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctct ... attttgttagCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAA
EST: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAG CCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAAEST: gi|9259629|gb|BE347776.1|BE347776
genomic: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctct ... attttgttagCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAA
EST: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAG CCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAAEST: gi|10846631|gb|BF069467.1|BF069467
genomic: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctct ... attttgttagCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAA
EST: CAGATGCAGTTAGTGTAGTCACAGGAATAGTATGCTGTGCAGGACTGAAG CCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGGTTTGGCCAACAAAEST: gi|209718278|gb|BW657870.1|BW657870
genomic: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctct ... attttgttagCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAA
EST: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAG CCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAAEST: gi|192333074|gb|FK026403.1|FK026403
genomic: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctct ... attttgttagCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAA
EST: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAG CCAACAGTTGCAGCGATAGAAGCAGG-AAAGACATAGCTTTGGCCAACAA-
genomic: CAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctct ... attttgttagCCAACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCCAACAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCTCGTCACCCAGATGCAGTTAGTGTAGTCACAGGAATAGTAGGCTGTGCAGGACTGAAGgtaaacctctttttcctattttggcccttcttggtaaccaatctctttgctgtgccatgtaatgaggtctttagtgtgcaatatctgcatatcttttaat
- - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG