1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAGGCTTATTCCAGCACACAGCAAGGGCAAACCTCCCTCATATTATATTATTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggctaatccagcatccctaattccctatgcattaataattccgttatttggtgtcttaggtgttgctgtttgttttactattgttaatattgat...
species | Glycine max |
transcript | GLYMA05G01930.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|26057704|gb|CA800618.1|CA800618
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|14991232|gb|BI316905.1|BI316905
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|51345186|gb|CO985919.1|CO985919
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|13562731|gb|BG550951.1|BG550951
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGEST: gi|16996432|gb|BM085804.1|BM085804
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
EST: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAG TATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
genomic: TTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggct ... gaatgaacagTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGGCTTATTCCAGCACACAGCAAGGGCAAACCTCCCTCATATTATATTATTGCTGGATTTGTTTTTACAACTGTTTCTGTTCCATATCTTCGTTCCGAGgtctgtggctaatccagcatccctaattccctatgcattaataattccgttatttggtgtcttaggtgttgctgtttgttttactattgttaatattgat
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