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ATATCTTATGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGgtatttcaaactaaagatttttttaaattttactttattatgtatagctgttacctgttgtattcaagataaactttttcttttttaattggaaaaattaaataatctatactgtgaccctcag
species | Glycine max |
transcript | GLYMA05G01300.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAG GTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTACEST: gi|14259715|gb|BG882623.1|BG882623
genomic: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGgtatttcaaa ... tgaccctcagGTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTAC
EST: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAG GTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTACEST: gi|19053090|gb|BM731757.1|BM731757
genomic: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGgtatttcaaa ... tgaccctcagGTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTAC
EST: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAG GTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTACEST: gi|22931742|gb|BU548881.1|BU548881
genomic: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGgtatttcaaa ... tgaccctcagGTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTAC
EST: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAG GTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTAC
genomic: TGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGgtatttcaaa ... tgaccctcagGTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATCTTATGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGgtatttcaaactaaagatttttttaaattttactttattatgtatagctgttacctgttgtattcaagataaactttttcttttttaattggaaaaattaaataatctatactgtgaccctcag
- - - - - - TGGAGA
- - - - - - GGAGAT
- - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - AGCTCA