1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGGCCATCATCAAGTGATCGACGTGGATATGGAGGAGGAGGTGGTAATGGTGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccattaggaaaatcttttttatttgatatagaaaaggacagagggttaaaacaccatattttttcccttcagactgaacatccatttagctttg...
species | Glycine max |
transcript | GLYMA04G40740.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAG TTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGEST: gi|207762279|gb|GD731600.1|GD731600
genomic: GGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccat ... tcatctacagTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
EST: CGGGGGTCGTTATGGCATCTCACGCCATTCTGAATTTCGAG TTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGEST: gi|193325939|gb|FK291022.1|FK291022
genomic: CGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccat ... tcatctacagTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
EST: GGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAG TTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGEST: gi|209718059|gb|BW671892.1|BW671892
genomic: GGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccat ... tcatctacagTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
EST: TGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAG TTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGEST: gi|192301101|gb|FG990141.1|FG990141
genomic: TGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccat ... tcatctacagTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
EST: TGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAG TTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAGEST: gi|193350079|gb|FK315753.1|FK315753
genomic: TGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccat ... tcatctacagTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
EST: TGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAG TTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
genomic: TGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccat ... tcatctacagTTATTGTTCGTGGACTCCCATCTTCTGCATCTTGGCAAGATTTGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGCCATCATCAAGTGATCGACGTGGATATGGAGGAGGAGGTGGTAATGGTGGAGCAGGCGGGGGTCGTTTTGGCATCTCACGCCATTCTGAATTTCGAGgtgggtccattaggaaaatcttttttatttgatatagaaaaggacagagggttaaaacaccatattttttcccttcagactgaacatccatttagctttg
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG