1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATTGAGATATGCGGTACTCAACTTGGAGGTTATTCAAGCAGCAATTCATTTAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaatttatgtcgcttctcacaatcccccctcccccaaagttcttcatacatgcagacaaaggattgttttggtaaaactgaattctgacgaagg...
species | Glycine max |
transcript | GLYMA04G03290.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAACEST: gi|58020362|gb|CX707104.1|CX707104
genomic: CTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
EST: TAGCCATACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAACEST: gi|208192105|gb|GD990639.1|GD990639
genomic: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
EST: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAACEST: gi|58016809|gb|CX703551.1|CX703551
genomic: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
EST: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAACEST: gi|192323065|gb|FK016316.1|FK016316
genomic: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
EST: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAACEST: gi|192326921|gb|FK015148.1|FK015148
genomic: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
EST: TAGCCAAACAGGAAAGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTEST: gi|10848246|gb|BF070781.1|BF070781
genomic: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCT
EST: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAG ATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
genomic: TAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaat ... ttttggcaagATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGAGATATGCGGTACTCAACTTGGAGGTTATTCAAGCAGCAATTCATTTAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGgtattttaatttatgtcgcttctcacaatcccccctcccccaaagttcttcatacatgcagacaaaggattgttttggtaaaactgaattctgacgaagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -atccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccccc