1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATATGGACCTCCAGGAACTGGAAAAACACTAATTGCCCGTGCTTGTGCAGCACAAACAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAGgtatgactcttccatttttacccgtttaattttcttatcatgactagtaatttcattgtatcttattttgaattgttggcaattttaatttactgaattt...
species | Glycine max |
transcript | GLYMA03G39500.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CACAAACAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAG ATGTTTATAGGAGACGGAGCAAAACTTGTCCAGGATGCCTTTCAGCTGGCAEST: gi|16281884|gb|BI944719.1|BI944719
genomic: CACAAACAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAGgtatgactct ... aattttacagATGTTTATAGGAGACGGAGCAAAACTTGTCCAGGATGCCTTTCAGCTGGCA
EST: CACAAACAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAG ATGTTTATAGGAGACGGAGCAAAACTTGTCCAGGATGCCTTTCAACTGGCA
genomic: CACAAACAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAGgtatgactct ... aattttacagATGTTTATAGGAGACGGAGCAAAACTTGTCCAGGATGCCTTTCAGCTGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGGACCTCCAGGAACTGGAAAAACACTAATTGCCCGTGCTTGTGCAGCACAAACAAATGCCACTTTTCTGAAGTTGGCAGGTCCACAGCTGGTCCAGgtatgactcttccatttttacccgtttaattttcttatcatgactagtaatttcattgtatcttattttgaattgttggcaattttaatttactgaattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcttcc