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ACTTGAGTATGTTCCTGAAACAGTTAATCGTGTGATCAAACATTACAACAAGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaatcatgtcagtttggttttgtcatgacccttttgtcagttttattttggaaaatagccgtgttaatgttttggattattttctagccctct...
species | Glycine max |
transcript | GLYMA03G38850.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAG ATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGGEST: gi|17519874|gb|BM188916.1|BM188916
genomic: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaa ... tatactgcagATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGG
EST: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAG ATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGGEST: gi|10843182|gb|BF066495.1|BF066495
genomic: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaa ... tatactgcagATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGG
EST: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAG ATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGGEST: gi|192296806|gb|FG993104.1|FG993104
genomic: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaa ... tatactgcagATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGG
EST: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAG ATCTTTAGG-CACTATCTTATATTCATCGTTGCATTGGAGTCTGCCAEST: gi|298174237|gb|HO017573.1|HO017573
genomic: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaa ... tatactgcagATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCA
EST: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAG ATCTTTAGGGCACTATCTTATATTCATCGTTGC
genomic: AGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaa ... tatactgcagATCTTTAGGGCACTATCTTATATTCATCGTTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTGAGTATGTTCCTGAAACAGTTAATCGTGTGATCAAACATTACAACAAGTTGAACCAACGGATGCCTCTGATATATGTAAAACTCTATACATACCAGgtatgcttaatcatgtcagtttggttttgtcatgacccttttgtcagttttattttggaaaatagccgtgttaatgttttggattattttctagccctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaata