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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaattaacaagcttggaaactggtgtattgtctcattgtttggaacctgaaggataatatgaactctggaatgtaggaattagaaaacgctttcg...

Basic information

species Glycine max
transcript GLYMA03G38810.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213596238|gb|DB960170.1|DB960170
EST:     TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAG                         ATCTGGACTTCAGTTTTTTAGAGATGA
genomic: TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaatt ... ttgtgcatagATCTGGACTTCAGTTTTTTAGAGATGA
EST: gi|151402134|gb|EV271947.1|EV271947
EST:     TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAG                         ATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
genomic: TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaatt ... ttgtgcatagATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
EST: gi|151395479|gb|EV265356.1|EV265356
EST:     TAGGGGGATAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAG                         ATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
genomic: TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaatt ... ttgtgcatagATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
EST: gi|37997687|gb|CF809276.1|CF809276
EST:     TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAG                         ATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
genomic: TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaatt ... ttgtgcatagATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
EST: gi|151407958|gb|EV277773.1|EV277773
EST:     TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAG                         ATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
genomic: TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaatt ... ttgtgcatagATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
EST: gi|15202616|gb|BI425495.1|BI425495
EST:     TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAG                         ATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA
genomic: TAGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGgtacgcaatt ... ttgtgcatagATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAA