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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCAGgtgatcctcatattttctcacactgacatctttaaatacattcaatgttaaaagagtttctagctgatccttcatccttgtgctgatgattcag

Basic information

species Glycine max
transcript GLYMA03G38520.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192323979|gb|FK015700.1|FK015700
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|192329589|gb|FK021903.1|FK021903
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|151398613|gb|EV268484.1|EV268484
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|19346536|gb|BM891416.1|BM891416
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|120532302|gb|EH260435.1|EH260435
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|6134067|gb|AW132396.1|AW132396
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|18713013|gb|BM522699.1|BM522699
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|192308925|gb|FK002149.1|FK002149
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|151411964|gb|EV281775.1|EV281775
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|6666111|gb|AW277570.1|AW277570
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|207761165|gb|GD733298.1|GD733298
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|10238899|gb|BE807795.1|BE807795
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG
EST: gi|9986530|gb|BE660638.1|BE660638
EST:     TTGGAAGAATTCTAGATCAG
genomic: TTGGAAGAATTCTAGATCAG