1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAAAAGGGATTCTTCCTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAATgtaagtggtgatttctgtttgttgtgtttcttggaataggaaaaagaatgcagactaattttctttgggcctttccatttatattttgtatatctttgaa...
species | Glycine max |
transcript | GLYMA03G35170.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAAT ATCCATGGAGACCCGGAAGCCGCAGATATTGTGTTTACCTCTGGGGCAGATEST: gi|16105461|gb|BI893201.1|BI893201
genomic: GTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAATgtaagtggtg ... ctacttgcagATCCATGGAGACCCGGAAGCCGCAGATATTGTGTTTACCTCTGGGGCAGAT
EST: GTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAAT ATCCATGGAGACCCGGAAGCCGCAGATATTGTGTTTACCTCTGGGGCAGAT
genomic: GTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAATgtaagtggtg ... ctacttgcagATCCATGGAGACCCGGAAGCCGCAGATATTGTGTTTACCTCTGGGGCAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAAAGGGATTCTTCCTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAATgtaagtggtgatttctgtttgttgtgtttcttggaataggaaaaagaatgcagactaattttctttgggcctttccatttatattttgtatatctttgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctttcc