1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGGTTTAGCACTTGCTAAAGAATTGGGGTGTTTGCTTCTTGAATGTAGTGCTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAGgtacagtttttagaagtttgcttcagtgctgttatgtcttgtacataagtcaattttccaattaactgacagtagggtcatgaattaacccaagcctaat...
species | Glycine max |
transcript | GLYMA03G34330.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTTTGAGGAACTTGCTCTAAAG ATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGGEST: gi|192329517|gb|FK022209.1|FK022209
genomic: CTTTGAGGAACTTGCTCTAAAGgtacagtttt ... catttcgtagATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGG
EST: CCAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAG ATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGGEST: gi|151401317|gb|EV271131.1|EV271131
genomic: CTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAGgtacagtttt ... catttcgtagATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGG
EST: CCAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAG ATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGGEST: gi|214005459|gb|DB985525.1|DB985525
genomic: CTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAGgtacagtttt ... catttcgtagATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGG
EST: CTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAG ATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGGEST: gi|11688017|gb|BF595693.1|BF595693
genomic: CTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAGgtacagtttt ... catttcgtagATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGG
EST: CTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAG ATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGG
genomic: CTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAGgtacagtttt ... catttcgtagATAATGGAAGCTCCTAGTCTTTTGGAAGAAGGATCAACAGCAGTTAAAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTTTAGCACTTGCTAAAGAATTGGGGTGTTTGCTTCTTGAATGTAGTGCTAAAACAAGGGAAAATGTGGAGCAGTGCTTTGAGGAACTTGCTCTAAAGgtacagtttttagaagtttgcttcagtgctgttatgtcttgtacataagtcaattttccaattaactgacagtagggtcatgaattaacccaagcctaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG