1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGCATGTTCTTGGGTGGAGGTGCACTCTTGGGTGGAGAGCAAGGACTTCCTGTCACTATGAATACCATTAGCACGGgtctctcttcccactaacatgatatgcatgctttattctcttaagtttaatatttaatttccaatatgtttttattttcttatgaatgtgtacatataaatttcag
species | Glycine max |
transcript | GLYMA03G29820.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTTGGGTGGAGAGCAAGGACTTCCTGTCACTATGAATACCATTAGCACGG AGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCAAGAGGAGAACCACCEST: gi|21601517|gb|BQ611848.1|BQ611848
genomic: CTTGGGTGGAGAGCAAGGACTTCCTGTCACTATGAATACCATTAGCACGGgtctctcttc ... taaatttcagAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCAAGAGGAGAACCACC
EST: ATGAATACCATTAGCACGG AGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCAAGAGGAGAACCACC
genomic: ATGAATACCATTAGCACGGgtctctcttc ... taaatttcagAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCAAGAGGAGAACCACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCATGTTCTTGGGTGGAGGTGCACTCTTGGGTGGAGAGCAAGGACTTCCTGTCACTATGAATACCATTAGCACGGgtctctcttcccactaacatgatatgcatgctttattctcttaagtttaatatttaatttccaatatgtttttattttcttatgaatgtgtacatataaatttcag
- - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - AGCAAG