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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCATCACTTGCCACACTTACATGCTATCCTCTGGATACAGTGCGAAGACAGATGCAATTGAGGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAGgttaggattgctccatgaaccttttagcatcaacgtattttagttctaacatacttatatttgtggacacattactaatgaatacataaaatagttttca...

Basic information

species Glycine max
transcript GLYMA03G10900.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6666551|gb|AW278002.1|AW278002
EST:     GATGCAATTGAGGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAG                         GTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCA
genomic: GATGCAATTGAGGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAGgttaggattg ... attgatgcagGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCA
EST: gi|298181806|gb|HO025981.1|HO025981
EST:     GATGCAATTGAGGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAG                         GTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCA
genomic: GATGCAATTGAGGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAGgttaggattg ... attgatgcagGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCA
EST: gi|6916126|gb|AW397656.1|AW397656
EST:     GATGCAATTGAGGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAG                         GTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCA
genomic: GATGCAATTGAGGGGAACACCTTATAAGACAGTATTAGATGCCATTTCAGgttaggattg ... attgatgcagGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCA