Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGCATGCCAACCTCTGCTGCCCTGGATGTTGTTGCCAAACATCTGAATTTGAAATTTTTTGAGATATATTGCTCTTCAATgtcttttaagtatgaaaatacttgttggtggctattag

Basic information

species Glycine max
transcript GLYMA03G05150.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G05150.1 (Glycine max), 5'ss of exon 5
lower sequence: GRMZM2G109383_T02 (Zea mays), 5'ss of exon 12
GAGCATGCCAACCTCTGCTGCCCTGGATGTTGTTGCCAAACATCTGAATTTGAAATTTTTTGAGATATATTGCTC--TTCAATgtcttttaagtatgaaaatact-tgttggtg-gctattag---------------
|||||||||||| ||||||||||| ||||||||||| ||  || ||||  | || || |||||| || | |  |    ||   || |   |  | |   |||    | |   |  |  || |                
GAGCATGCCAACATCTGCTGCCCTTGATGTTGTTGCAAAGAATTTGAACCTTAAGTTCTTTGAGgtaaaatattaaaatcttggtttgcaagatttttgaatgtcatataaatctgacataaaaaaaccatgtttcag