1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTGTGCATGGAAGTGCACTGGGTGCCAAAGAAGTTGATGCCACCAGGCAGAACCTTGGATGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAAgtatggatgatgggtttagagatttcttttttcctgtgacactgctgaggtttataatgatactgaataagaattgcttgtctgtccccag
species | Glycine max |
transcript | GLYMA03G03200.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AACCTTGGATGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAA GCATTGGAGTCGCCACACCCCTGAGGGTGCTGCACTTGAAGCTGAATGGAAEST: gi|6567239|gb|AW234850.1|AW234850
genomic: AACCTTGGATGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAAgtatggatga ... ctgtccccagGCATTGGAGTCGCCACACCCCTGAGGGTGCTGCACTTGAAGCTGAGTGGAA
EST: TGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAA GCATTGGAGTCGCCACACCCCTGAGGGTGCTGCACTTGAAGCTGAATGGAA
genomic: TGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAAgtatggatga ... ctgtccccagGCATTGGAGTCGCCACACCCCTGAGGGTGCTGCACTTGAAGCTGAGTGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTGCATGGAAGTGCACTGGGTGCCAAAGAAGTTGATGCCACCAGGCAGAACCTTGGATGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAAgtatggatgatgggtttagagatttcttttttcctgtgacactgctgaggtttataatgatactgaataagaattgcttgtctgtccccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG