1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGTGTCTGTTGATTTGAACATGATGGCTAATGCATTCAAGACAACTGTTGCGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAGgtctgatttcacttaatttgccttgttttgtctatagcttgatttggttgaatttataatggaaagaaatcgacacctcagtattacattcgtttcattt...
species | Glycine max |
transcript | GLYMA03G01880.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAG GCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAAEST: gi|5760592|gb|AI965955.1|AI965955
genomic: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAGgtctgatttc ... cactttgcagGCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAA
EST: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAG GCTCGAATTGATTCGCACAACAAAATTNTGTATGCACGGCATGCGGATCAAEST: gi|151408473|gb|EV278281.1|EV278281
genomic: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAGgtctgatttc ... cactttgcagGCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAA
EST: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAG GCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAAEST: gi|58015910|gb|CX702652.1|CX702652
genomic: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAGgtctgatttc ... cactttgcagGCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAA
EST: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAG GCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAA
genomic: CGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAGgtctgatttc ... cactttgcagGCTCGAATTGATTCGCACAACAAAATTTTGTATGCACGGCATGCGGATCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGTCTGTTGATTTGAACATGATGGCTAATGCATTCAAGACAACTGTTGCGGGACTTGAGAAGGAACTAGAAGCATTGATTACTGATAATCAGATACAGgtctgatttcacttaatttgccttgttttgtctatagcttgatttggttgaatttataatggaaagaaatcgacacctcagtattacattcgtttcattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC