1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TAATACTTTCCCAAAGATGGGTGATACATGGATACCAGGAGACATTTTTGAAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAGgtaattaatccatgccgatatctctgaaaagtttaaatagtaatatcctcataagtgtggtttggtggccaaagttttaacaacatgaagttctaattggtgttttgcattgctcttaacag
species | Glycine max |
transcript | GLYMA02G47340.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CGGCAACTGTGCAG CTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTAEST: gi|254322560|gb|GR837974.1|GR837974
genomic: CGGCAACTGTGCAGgtaattaatc ... ctcttaacagCTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTA
EST: AAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAG CTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTAEST: gi|254328574|gb|GR832946.1|GR832946
genomic: AAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAGgtaattaatc ... ctcttaacagCTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTA
EST: AAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAG CTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTAEST: gi|192332567|gb|FK025672.1|FK025672
genomic: AAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAGgtaattaatc ... ctcttaacagCTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTA
EST: TTCGAAATTTCTTTGAGAATACGGCAACTGTGCAG CTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTAEST: gi|254322561|gb|GR837975.1|GR837975
genomic: TTCGAAATTTCTTTGAGAATACGGCAACTGTGCAGgtaattaatc ... ctcttaacagCTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTA
EST: AAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAG CTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTA
genomic: AAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAGgtaattaatc ... ctcttaacagCTTGATCACCGTATACTTGCAACTGCAACTCTGATTTCTGTGAGCATTTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAATACTTTCCCAAAGATGGGTGATACATGGATACCAGGAGACATTTTTGAAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACGGCAACTGTGCAGgtaattaatccatgccgatatctctgaaaagtttaaatagtaatatcctcataagtgtggtttggtggccaaagttttaacaacatgaagttctaattggtgttttgcattgctcttaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC