1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGGTCTGACTCTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacattgtgatgaggaagaaccttttattggatacagaatttcagtttgatattccctttgcag
species | Glycine max |
transcript | GLYMA02G31080.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAG GCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATTEST: gi|208184930|gb|GD984944.1|GD984944
genomic: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacat ... ccctttgcagGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATT
EST: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAG GCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATTEST: gi|193524564|gb|FK481931.1|FK481931
genomic: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacat ... ccctttgcagGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATT
EST: AAAATGATTTGAATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAG GCTATTCTGTTCAATGEST: gi|193495314|gb|FK459336.1|FK459336
genomic: AAAATGATTTGA-TTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacat ... ccctttgcagGCTATTCTGTTCAATG
EST: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAG GCTATTCTGTTCAATGEST: gi|208226254|gb|GE026771.1|GE026771
genomic: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacat ... ccctttgcagGCTATTCTGTTCAATG
EST: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAG GCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATTEST: gi|207795714|gb|GD766907.1|GD766907
genomic: AAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacat ... ccctttgcagGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATT
EST: AAGTGCAAGGGTAATATGAACAG GCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATT
genomic: AAGTGCAAGGGTAATATGAACAGgtaaaaacat ... ccctttgcagGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGGTCTGACTCTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGgtaaaaacattgtgatgaggaagaaccttttattggatacagaatttcagtttgatattccctttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT