1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CAGGCCTCCTATATTGCCTGGTTCATATGTGCAAGGGGCTTATGGTCCTGTACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagagggatatgtgtgtgtgtggtgaaaggtcaattttttcttcattttaggagttgctttattctgacatttttaaattggtatag
species | Glycine max |
transcript | GLYMA02G17260.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCG GCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCTEST: gi|193344884|gb|FK310432.1|FK310432
genomic: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagaggga ... attggtatagGCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCT
EST: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAATCATTATTCG GCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGEST: gi|208172185|gb|GD970650.1|GD970650
genomic: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagaggga ... attggtatagGCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGG
EST: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCG GCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCTEST: gi|22523662|gb|BU082473.1|BU082473
genomic: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagaggga ... attggtatagGCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCT
EST: CAATTTCCGGGATGGAGTCATTATTCG GCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCTEST: gi|193400041|gb|FK367010.1|FK367010
genomic: CAATTTCCGGGATGGAGTCATTATTCGgtgagaggga ... attggtatagGCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCT
EST: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCG GCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCTEST: gi|58016151|gb|CX702893.1|CX702893
genomic: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagaggga ... attggtatagGCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCT
EST: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCG GCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCT
genomic: TACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagaggga ... attggtatagGCACCTGTAAGTCCTGTGCCATCTCCTGGCGCTCAACCTGCTGTTGGGGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGGCCTCCTATATTGCCTGGTTCATATGTGCAAGGGGCTTATGGTCCTGTACTTCTTTCCCCAGGGGTTGTCCAATTTCCGGGATGGAGTCATTATTCGgtgagagggatatgtgtgtgtgtggtgaaaggtcaattttttcttcattttaggagttgctttattctgacatttttaaattggtatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA