1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ACTTCCTGATCGTTGTTATGCAATAACAGTGAAACATCCTCTGATGGTAGTGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatatttaatttttgctaaaatattttcagtgctgttgcttgtaaccttgtatgcaataatagatttgtataataatttattatgtatatagatagat...
species | Glycine max |
transcript | GLYMA02G13780.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAG ACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTTEST: gi|151398315|gb|EV268186.1|EV268186
genomic: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatattta ... atcctaacagACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTT
EST: TGGGAACTGCTGATAGAAATCTGATTGTCTTCA-CCTGCAAA-TCCTCAG ACTGA-TACAAGAGA-TCGTATCTCCC-TGAA-TATCEST: gi|58015700|gb|CX702442.1|CX702442
genomic: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatattta ... atcctaacagACTGAATACAAGAGAATCGTATCTCCCCTGAAATATC
EST: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACNTGCAAAATCCTCAG ACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTTEST: gi|42722614|gb|CK768513.1|CK768513
genomic: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatattta ... atcctaacagACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTT
EST: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAG ACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTTEST: gi|58015403|gb|CX702145.1|CX702145
genomic: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatattta ... atcctaacagACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTT
EST: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAG ACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTTEST: gi|10232293|gb|BE801181.1|BE801181
genomic: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatattta ... atcctaacagACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTT
EST: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAG ACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTT
genomic: TGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatattta ... atcctaacagACTGAATACAAGAGAATCGTATCTCCCCTGAAATATCAGACCAGATCTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTCCTGATCGTTGTTATGCAATAACAGTGAAACATCCTCTGATGGTAGTGGGAACTGCTGATAGAAATCTGATTGTCTTCAACCTGCAAAATCCTCAGgtgatatttaatttttgctaaaatattttcagtgctgttgcttgtaaccttgtatgcaataatagatttgtataataatttattatgtatatagatagat
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