Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTATCGTCAACATCATCTCCTGAGCCATCTGTGCCAGTTTCTGCTGAAACTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGAgtattcttcttctcttgatctatcagtttgttgcatgcagacacacgcacaattgaaatggttttgcttgtaattgtatgtttttatacaatatggtaac...

Basic information

species Glycine max
transcript GLYMA02G11300.2
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19268805|gb|BM885061.1|BM885061
EST:     CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGA                         CCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
genomic: CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGAgtattcttct ... attttttaagCCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
EST: gi|20448599|gb|BQ252723.1|BQ252723
EST:     CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGA                         CCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
genomic: CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGAgtattcttct ... attttttaagCCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
EST: gi|20812041|gb|BQ296519.1|BQ296519
EST:     CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGA                         CCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
genomic: CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGAgtattcttct ... attttttaagCCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
EST: gi|17153859|gb|BM143792.1|BM143792
EST:     CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGA                         CCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT
genomic: CTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAGTTACAGAgtattcttct ... attttttaagCCCGGTGTAGCTCCTATCCAAATTCATCATGGCTATAATTATAGAGGACGT