1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTGCTGTGTTTGCTAGTGGTGTTGATACATCTGCAACTGAGACTAAAGGAACTGTCCTCATACATACAGCTGAGCAGgtatatcaaaatgacaagagttttgaatttgattattacagtctccttactgttttatatagttatattttttttattgtttgagtggtgaagcctattt...
species | Glycine max |
transcript | GLYMA02G07910.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CATCTGCAACTGAGACTAAAGGAACTGTCCTCATACATACAGCTGAGCAG CTAGAAAATTATTCAAAAACTGAAGAGGCTAAAGTAGAGGAGCTCATCAAGEST: gi|298187418|gb|HO034567.1|HO034567
genomic: CATCTGCAACTGAGACTAAAGGAACTGTCCTCATACATACAGCTGAGCAGgtatatcaaa ... atttatatagCTAGAAAATTATTCAAAAACTGAAGAGGCTAAAGTAGAGGAGCTCATCAAG
EST: CATCTGCAACTGAGACTAAAGGAACTGTCCTCATACATACAGCTGAGCAG CTAGAAAATTATTCAAAAACTGAAGAGGCTAAAGTAGAGGAGCTCATCAAG
genomic: CATCTGCAACTGAGACTAAAGGAACTGTCCTCATACATACAGCTGAGCAGgtatatcaaa ... atttatatagCTAGAAAATTATTCAAAAACTGAAGAGGCTAAAGTAGAGGAGCTCATCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCTGTGTTTGCTAGTGGTGTTGATACATCTGCAACTGAGACTAAAGGAACTGTCCTCATACATACAGCTGAGCAGgtatatcaaaatgacaagagttttgaatttgattattacagtctccttactgttttatatagttatattttttttattgtttgagtggtgaagcctattt
- - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG