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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATAAGGGAAAGCATTAAAACAGAACAACCATGCACAGTACGTATTTTGAATTACAGGTTAATACTTCACTTTTgtgtctgctgcctaagccgtgaagtttatttattgaatatgctgaattagttttctgcaacactaacaggaag

Basic information

species Glycine max
transcript GLYMA02G02600.5
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G02600.5 (Glycine max), 5'ss of exon 5
lower sequence: Vv01s0026g01590.t01 (Vitis vinifera), 5'ss of exon 6
ATAAGGGAAAGCATTAAAACAGAACAACCATGCACAGTACGTATTTTGAATTACAGGTTAATACTTCACTTTTgtgtctgctgcctaagccgtgaagtttatttattgaatatgctgaat-tagttttctgcaacactaacaggaag
 ||| |||||||||  |||| || ||| |||||||||||||||| || ||||||||||| |||||| ||| |  | ||    |  |      |||| |  | ||  |  | ||    |   |  ||||||||  |  |  |||    
GTAAAGGAAAGCATCCAAACTGAGCAAGCATGCACAGTACGTATCTTAAATTACAGgttgatacttgactatgctttccaacgtattttagatgaactgcagtttcttcagatttaaaccatgtttttctgctcctttctcag----