1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GTAATGCACATTGCAGCCGCAATGGAAATAAACTCAAGACTAATTCCCAGCCTGAAAACCTTACATGGTACACTAAACTCAAAGgtttgaattctagttcatacttttagactaattataatttataatatgttggatatattacagtccccctcttgccattttgtgagttgtgtcattctgg...
species | Glycine max |
transcript | GLYMA02G01920.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAAGACTAATTCCCAGCCTGAAAACCTTACATGGTACACTAAACTCAAAG TCAATTGAATTCAAAGATATTGTCAAGATTGGACGCACTCATACTCAAGATEST: gi|151409155|gb|EV278963.1|EV278963
genomic: CAAGACTAATTCCCAGCCTGAAAACCTTACATGGTACACTAAACTCAAAGgtttgaattc ... aatataccagTCAATTGAATTCAAAGATATTGTCAAGATTGGACGCACTCATACTCAAGAT
EST: CAAGACTAATTCCCAGCCTGAAAACCTTACATGGTACACTAAACTCAAAG TCAATTGAATTCAAAGATATTGTCAAGATTGGACGCACTCATACTCAAGATEST: gi|192322683|gb|FK015020.1|FK015020
genomic: CAAGACTAATTCCCAGCCTGAAAACCTTACATGGTACACTAAACTCAAAGgtttgaattc ... aatataccagTCAATTGAATTCAAAGATATTGTCAAGATTGGACGCACTCATACTCAAGAT
EST: AATTATGGGGAGCACAAACTCAAAGATCGTTGCAGAACTTCGATATCGGTGGGCCCCGCGAACGCATGCCCGAACCCATCATTCGCGCCTTTGGCGTCTTGEST: gi|192310776|gb|FK000290.1|FK000290
genomic: AATTATGGGGAGCACAAACTCAAAGATCGTTGCAGAACTTCGATATCGGTGGGCCCCGCGAACGCATGCCCGAACCCATCATTCGCGCCTTTGGCGTCTTG
EST: AATTATGGGGAGCACAAACTCAAAGATCGTTGCAGAACTTCGATATCGGTGGGCCCCGCGAACGCATGCCCGAACCCATCATTCGCGCCTTTGGCGTCTTGEST: gi|209717303|gb|BW659018.1|BW659018
genomic: AATTATGGGGAGCACAAACTCAAAGATCGTTGCAGAACTTCGATATCGGTGGGCCCCGCGAACGCATGCCCGAACCCATCATTCGCGCCTTTGGCGTCTTG
EST: AATTATGGGGAGCACAAACTCAAAGATCGTTGCAGAACTTCGATATCGGTGGGCCCCGCGAACGCATGCCCGAACCCATCATTCGCGCCTTTGGCGTCTTG
genomic: AATTATGGGGAGCACAAACTCAAAGATCGTTGCAGAACTTCGATATCGGTGGGCCCCGCGAACGCATGCCCGAACCCATCATTCGCGCCTTTGGCGTCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAATGCACATTGCAGCCGCAATGGAAATAAACTCAAGACTAATTCCCAGCCTGAAAACCTTACATGGTACACTAAACTCAAAGgtttgaattctagttcatacttttagactaattataatttataatatgttggatatattacagtccccctcttgccattttgtgagttgtgtcattctgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccctc