1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ACTTGAGTATGTTCCTGAGACTGTCCACCGAGTTATCAGGCATTACAACAAAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttctatgtaatatattaaaattaattttttttctttcttgtaagttttactattaaggcaattgtctatatcactttgttgtttctcatttcttctatttcttattttttag
species | Glycine max |
transcript | GLYMA02G01220.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAG ATATGTAGAGCACTAGCTTATAEST: gi|207706316|gb|GD686934.1|GD686934
genomic: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttct ... tattttttagATATGTAGAGCACTAGCTTATA
EST: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAG ATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGGEST: gi|207846087|gb|GD820304.1|GD820304
genomic: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttct ... tattttttagATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGG
EST: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTC-ATTTTTACCAG ATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGGEST: gi|120532325|gb|EH260458.1|EH260458
genomic: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttct ... tattttttagATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGG
EST: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTT-ACCAG ATATGTAGAGCACEST: gi|12773476|gb|BG238403.1|BG238403
genomic: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttct ... tattttttagATATGTAGAGCAC
EST: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAG ATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGGCTCACAGGEST: gi|4396096|gb|AI495093.1|AI495093
genomic: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttct ... tattttttagATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGG
EST: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAG ATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGG
genomic: AAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttct ... tattttttagATATGTAGAGCACTAGCTTATATTCACAACTGCATTGGAGTGTCTCACAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTGAGTATGTTCCTGAGACTGTCCACCGAGTTATCAGGCATTACAACAAAATGAATCAAAGAATGCCTTTGATATACGTGAAACTCTATTTTTACCAGgtatatttctatgtaatatattaaaattaattttttttctttcttgtaagttttactattaaggcaattgtctatatcactttgttgtttctcatttcttctatttcttattttttag
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